Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 AC092068.3-201ENST00000587894 2016 ntBASIC16.03■□□□□ 0.16
RAB38P57729 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB38P57729 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB38P57729 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
RAB38P57729 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB38P57729 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB38P57729 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB38P57729 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RAB38P57729 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB38P57729 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 AC129492.6-201ENST00000611383 1305 ntBASIC16.02■□□□□ 0.16
RAB38P57729 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB38P57729 VN2R19P-201ENST00000442399 1052 ntBASIC16.02■□□□□ 0.16
RAB38P57729 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB38P57729 OR7E47P-204ENST00000575924 449 ntBASIC16.02■□□□□ 0.16
RAB38P57729 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB38P57729 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB38P57729 REXO1L3P-201ENST00000622202 1288 ntBASIC16.02■□□□□ 0.16
RAB38P57729 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RAB38P57729 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.02■□□□□ 0.15
RAB38P57729 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.02■□□□□ 0.15
RAB38P57729 KRT8P49-201ENST00000604166 1432 ntBASIC16.02■□□□□ 0.15
RAB38P57729 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB38P57729 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 TOP3BP1-201ENST00000420768 1380 ntBASIC16.01■□□□□ 0.15
RAB38P57729 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB38P57729 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAB38P57729 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
RAB38P57729 AL022342.1-201ENST00000400363 863 ntBASIC16.01■□□□□ 0.15
RAB38P57729 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 AC107918.2-201ENST00000530817 355 ntBASIC16.01■□□□□ 0.15
RAB38P57729 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAB38P57729 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms