Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.79■□□□□ 0.6
PEX3P56589 KRT18P58-201ENST00000527480 1120 ntBASIC18.79■□□□□ 0.6
PEX3P56589 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.79■□□□□ 0.6
PEX3P56589 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 DUX4L17-201ENST00000557360 1267 ntBASIC18.79■□□□□ 0.6
PEX3P56589 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.79■□□□□ 0.6
PEX3P56589 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.79■□□□□ 0.6
PEX3P56589 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PEX3P56589 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.78■□□□□ 0.6
PEX3P56589 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PEX3P56589 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PEX3P56589 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.78■□□□□ 0.6
PEX3P56589 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 IGLL3P-201ENST00000412472 434 ntBASIC18.78■□□□□ 0.6
PEX3P56589 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 PMS2P1-201ENST00000431037 1228 ntBASIC18.78■□□□□ 0.6
PEX3P56589 KRT18P2-201ENST00000447938 1258 ntBASIC18.78■□□□□ 0.6
PEX3P56589 POLD2P1-201ENST00000511220 997 ntBASIC18.78■□□□□ 0.6
PEX3P56589 FAM197Y3-203ENST00000618346 717 ntBASIC18.78■□□□□ 0.6
PEX3P56589 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.78■□□□□ 0.6
PEX3P56589 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.78■□□□□ 0.6
PEX3P56589 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PEX3P56589 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PEX3P56589 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.77■□□□□ 0.6
PEX3P56589 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.77■□□□□ 0.6
PEX3P56589 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.77■□□□□ 0.6
PEX3P56589 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 KRT18P3-201ENST00000451602 1288 ntBASIC18.77■□□□□ 0.6
PEX3P56589 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.77■□□□□ 0.6
PEX3P56589 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.77■□□□□ 0.6
PEX3P56589 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.77■□□□□ 0.6
PEX3P56589 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.77■□□□□ 0.6
PEX3P56589 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.77■□□□□ 0.6
PEX3P56589 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PEX3P56589 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.77■□□□□ 0.59
PEX3P56589 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PEX3P56589 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PEX3P56589 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
PEX3P56589 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PEX3P56589 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.76■□□□□ 0.59
PEX3P56589 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.76■□□□□ 0.59
PEX3P56589 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PEX3P56589 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PEX3P56589 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PEX3P56589 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.76■□□□□ 0.59
PEX3P56589 AL591424.1-201ENST00000442569 1213 ntBASIC18.76■□□□□ 0.59
PEX3P56589 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
PEX3P56589 AC107918.2-201ENST00000530817 355 ntBASIC18.76■□□□□ 0.59
PEX3P56589 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PEX3P56589 REXO1L3P-201ENST00000622202 1288 ntBASIC18.76■□□□□ 0.59
PEX3P56589 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
PEX3P56589 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 1102.3 ms