Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.71■□□□□ 0.59
ATN1P54259 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.71■□□□□ 0.59
ATN1P54259 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.71■□□□□ 0.59
ATN1P54259 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.71■□□□□ 0.59
ATN1P54259 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
ATN1P54259 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.71■□□□□ 0.59
ATN1P54259 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.71■□□□□ 0.59
ATN1P54259 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.71■□□□□ 0.59
ATN1P54259 AL031055.1-201ENST00000606362 631 ntBASIC18.71■□□□□ 0.59
ATN1P54259 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 AC018529.1-201ENST00000613063 361 ntBASIC18.71■□□□□ 0.59
ATN1P54259 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
ATN1P54259 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATN1P54259 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
ATN1P54259 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATN1P54259 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 AC010336.2-201ENST00000564226 506 ntBASIC18.7■□□□□ 0.58
ATN1P54259 TP53TG3HP-202ENST00000569755 579 ntBASIC18.7■□□□□ 0.58
ATN1P54259 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.7■□□□□ 0.58
ATN1P54259 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.7■□□□□ 0.58
ATN1P54259 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.7■□□□□ 0.58
ATN1P54259 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 AC007541.1-201ENST00000570282 1469 ntBASIC18.7■□□□□ 0.58
ATN1P54259 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATN1P54259 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATN1P54259 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATN1P54259 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATN1P54259 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATN1P54259 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 RNU1-129P-201ENST00000384064 167 ntBASIC18.69■□□□□ 0.58
ATN1P54259 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.69■□□□□ 0.58
ATN1P54259 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.69■□□□□ 0.58
ATN1P54259 U1.21-201ENST00000580816 167 ntBASIC18.69■□□□□ 0.58
ATN1P54259 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC18.69■□□□□ 0.58
ATN1P54259 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.69■□□□□ 0.58
ATN1P54259 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.69■□□□□ 0.58
ATN1P54259 GAPDHP74-202ENST00000632456 782 ntBASIC18.69■□□□□ 0.58
ATN1P54259 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.69■□□□□ 0.58
ATN1P54259 AC138969.3-201ENST00000546612 1459 ntBASIC18.69■□□□□ 0.58
ATN1P54259 AC138932.2-201ENST00000548268 1459 ntBASIC18.69■□□□□ 0.58
ATN1P54259 AC126755.4-201ENST00000549796 1459 ntBASIC18.69■□□□□ 0.58
ATN1P54259 AL353732.1-201ENST00000569618 1459 ntBASIC18.69■□□□□ 0.58
ATN1P54259 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ATN1P54259 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
ATN1P54259 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATN1P54259 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATN1P54259 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATN1P54259 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms