Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATXN3P54252 NKILA-202ENST00000614771 2598 ntBASIC17.5■□□□□ 0.39
ATXN3P54252 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ATXN3P54252 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.5■□□□□ 0.39
ATXN3P54252 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.5■□□□□ 0.39
ATXN3P54252 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.5■□□□□ 0.39
ATXN3P54252 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.5■□□□□ 0.39
ATXN3P54252 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.5■□□□□ 0.39
ATXN3P54252 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.5■□□□□ 0.39
ATXN3P54252 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.5■□□□□ 0.39
ATXN3P54252 MIR3197-201ENST00000582241 73 ntBASIC17.5■□□□□ 0.39
ATXN3P54252 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
ATXN3P54252 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 AC002310.6-201ENST00000624451 1377 ntBASIC17.5■□□□□ 0.39
ATXN3P54252 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ATXN3P54252 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATXN3P54252 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.5■□□□□ 0.39
ATXN3P54252 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
ATXN3P54252 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 UBALD1-205ENST00000590891 2641 ntBASIC17.49■□□□□ 0.39
ATXN3P54252 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 MCCD1P2-201ENST00000423228 335 ntBASIC17.49■□□□□ 0.39
ATXN3P54252 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.49■□□□□ 0.39
ATXN3P54252 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.49■□□□□ 0.39
ATXN3P54252 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ATXN3P54252 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
ATXN3P54252 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATXN3P54252 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATXN3P54252 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
ATXN3P54252 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATXN3P54252 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ATXN3P54252 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATXN3P54252 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
ATXN3P54252 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms