Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIMK2P53671 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.25■□□□□ 0.35
LIMK2P53671 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 SCARNA2-201ENST00000458748 420 ntBASIC17.24■□□□□ 0.35
LIMK2P53671 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 RNPS1P1-201ENST00000507437 918 ntBASIC17.24■□□□□ 0.35
LIMK2P53671 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.24■□□□□ 0.35
LIMK2P53671 AC073648.2-201ENST00000510116 352 ntBASIC17.24■□□□□ 0.35
LIMK2P53671 STK19B-204ENST00000512515 211 ntBASIC17.24■□□□□ 0.35
LIMK2P53671 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.24■□□□□ 0.35
LIMK2P53671 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.24■□□□□ 0.35
LIMK2P53671 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.24■□□□□ 0.35
LIMK2P53671 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.24■□□□□ 0.35
LIMK2P53671 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LIMK2P53671 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
LIMK2P53671 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
LIMK2P53671 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LIMK2P53671 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.23■□□□□ 0.35
LIMK2P53671 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.23■□□□□ 0.35
LIMK2P53671 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.23■□□□□ 0.35
LIMK2P53671 AC003669.1-201ENST00000334569 611 ntBASIC17.23■□□□□ 0.35
LIMK2P53671 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.23■□□□□ 0.35
LIMK2P53671 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 AC023511.2-201ENST00000618803 211 ntBASIC17.23■□□□□ 0.35
LIMK2P53671 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.23■□□□□ 0.35
LIMK2P53671 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.23■□□□□ 0.35
LIMK2P53671 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LIMK2P53671 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LIMK2P53671 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
LIMK2P53671 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LIMK2P53671 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 AP005117.1-201ENST00000584346 1413 ntBASIC17.22■□□□□ 0.35
LIMK2P53671 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LIMK2P53671 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LIMK2P53671 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LIMK2P53671 AC132938.5-201ENST00000624980 1813 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms