Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.6■□□□□ 0.25
PDX1P52945 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDX1P52945 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 AL139400.1-201ENST00000366220 510 ntBASIC16.59■□□□□ 0.25
PDX1P52945 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 ACTG1P14-201ENST00000446382 1122 ntBASIC16.59■□□□□ 0.25
PDX1P52945 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.59■□□□□ 0.25
PDX1P52945 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.59■□□□□ 0.25
PDX1P52945 AC023141.13-201ENST00000604991 943 ntBASIC16.59■□□□□ 0.25
PDX1P52945 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 AC092902.6-201ENST00000641783 218 ntBASIC16.59■□□□□ 0.25
PDX1P52945 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
PDX1P52945 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PDX1P52945 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 PI4KAP1-204ENST00000612579 1703 ntBASIC16.59■□□□□ 0.25
PDX1P52945 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PDX1P52945 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PDX1P52945 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.59■□□□□ 0.25
PDX1P52945 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PDX1P52945 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PDX1P52945 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.58■□□□□ 0.25
PDX1P52945 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PDX1P52945 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
PDX1P52945 MYCLP1-201ENST00000372451 1075 ntBASIC16.58■□□□□ 0.24
PDX1P52945 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 ACTG1P4-201ENST00000425123 1122 ntBASIC16.58■□□□□ 0.24
PDX1P52945 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PDX1P52945 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.58■□□□□ 0.24
PDX1P52945 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PDX1P52945 AL513210.1-201ENST00000629608 234 ntBASIC16.58■□□□□ 0.24
PDX1P52945 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 AL590787.1-201ENST00000568856 1315 ntBASIC16.58■□□□□ 0.24
PDX1P52945 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.58■□□□□ 0.24
PDX1P52945 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.58■□□□□ 0.24
PDX1P52945 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PDX1P52945 LTB4R2-202ENST00000528054 3092 ntBASIC16.58■□□□□ 0.24
PDX1P52945 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 PP12613-201ENST00000424958 2230 ntBASIC16.57■□□□□ 0.24
PDX1P52945 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDX1P52945 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDX1P52945 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.57■□□□□ 0.24
PDX1P52945 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PDX1P52945 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.57■□□□□ 0.24
PDX1P52945 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.57■□□□□ 0.24
PDX1P52945 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 TSEN15P1-201ENST00000423257 515 ntBASIC16.57■□□□□ 0.24
PDX1P52945 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDX1P52945 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.57■□□□□ 0.24
PDX1P52945 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms