Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP11P51784 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.24■□□□□ 0.67
USP11P51784 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.24■□□□□ 0.67
USP11P51784 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.24■□□□□ 0.67
USP11P51784 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.24■□□□□ 0.67
USP11P51784 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.24■□□□□ 0.67
USP11P51784 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP11P51784 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.24■□□□□ 0.67
USP11P51784 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 AL353732.1-201ENST00000569618 1459 ntBASIC19.23■□□□□ 0.67
USP11P51784 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.23■□□□□ 0.67
USP11P51784 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.23■□□□□ 0.67
USP11P51784 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
USP11P51784 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
USP11P51784 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USP11P51784 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 AC091167.2-201ENST00000579581 588 ntBASIC19.23■□□□□ 0.67
USP11P51784 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
USP11P51784 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.23■□□□□ 0.67
USP11P51784 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 AC007064.4-201ENST00000637740 555 ntBASIC19.23■□□□□ 0.67
USP11P51784 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.23■□□□□ 0.67
USP11P51784 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.23■□□□□ 0.67
USP11P51784 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP11P51784 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 AL121761.2-201ENST00000598007 1648 ntBASIC19.22■□□□□ 0.67
USP11P51784 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.22■□□□□ 0.67
USP11P51784 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP11P51784 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
USP11P51784 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
USP11P51784 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
USP11P51784 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 AC040169.1-201ENST00000565382 521 ntBASIC19.22■□□□□ 0.67
USP11P51784 MPDU1-223ENST00000582151 728 ntBASIC19.22■□□□□ 0.67
USP11P51784 AC023141.13-201ENST00000604991 943 ntBASIC19.22■□□□□ 0.67
USP11P51784 AC004877.2-201ENST00000623941 599 ntBASIC19.22■□□□□ 0.67
USP11P51784 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP11P51784 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.22■□□□□ 0.67
USP11P51784 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
USP11P51784 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.21■□□□□ 0.67
USP11P51784 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP11P51784 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms