Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.81□□□□□ -0.04
HCFC1P51610 AL512356.2-201ENST00000546955 174 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.81□□□□□ -0.04
HCFC1P51610 MIR3909-201ENST00000579518 119 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 MIR6080-201ENST00000617359 66 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 AC084121.4-201ENST00000641598 221 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 AF228730.8-201ENST00000642140 221 ntBASIC14.81□□□□□ -0.04
HCFC1P51610 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
HCFC1P51610 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HCFC1P51610 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HCFC1P51610 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.8□□□□□ -0.04
HCFC1P51610 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HCFC1P51610 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HCFC1P51610 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.8□□□□□ -0.04
HCFC1P51610 MEIS3P1-201ENST00000495167 958 ntBASIC14.8□□□□□ -0.04
HCFC1P51610 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.8□□□□□ -0.04
HCFC1P51610 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.8□□□□□ -0.04
HCFC1P51610 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.8□□□□□ -0.04
HCFC1P51610 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.8□□□□□ -0.04
HCFC1P51610 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HCFC1P51610 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.79□□□□□ -0.04
HCFC1P51610 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HCFC1P51610 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HCFC1P51610 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 LTB4R2-202ENST00000528054 3092 ntBASIC14.79□□□□□ -0.04
HCFC1P51610 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.79□□□□□ -0.04
HCFC1P51610 AC125807.1-201ENST00000483097 614 ntBASIC14.79□□□□□ -0.04
HCFC1P51610 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.79□□□□□ -0.04
HCFC1P51610 AC026150.2-201ENST00000564693 1156 ntBASIC14.79□□□□□ -0.04
HCFC1P51610 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.79□□□□□ -0.04
HCFC1P51610 AC012645.4-201ENST00000610691 1061 ntBASIC14.79□□□□□ -0.04
HCFC1P51610 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.79□□□□□ -0.04
HCFC1P51610 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.79□□□□□ -0.04
HCFC1P51610 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
HCFC1P51610 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.79□□□□□ -0.04
HCFC1P51610 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms