Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ATP5G2P1-201ENST00000433580 426 ntBASIC15.22■□□□□ 0.03
SRP9P49458 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.22■□□□□ 0.03
SRP9P49458 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.22■□□□□ 0.03
SRP9P49458 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.22■□□□□ 0.03
SRP9P49458 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.22■□□□□ 0.03
SRP9P49458 AP002414.4-201ENST00000589764 1148 ntBASIC15.22■□□□□ 0.03
SRP9P49458 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
SRP9P49458 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SRP9P49458 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 AC246785.2-201ENST00000432512 513 ntBASIC15.21■□□□□ 0.03
SRP9P49458 DRAXINP1-201ENST00000437611 948 ntBASIC15.21■□□□□ 0.03
SRP9P49458 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.21■□□□□ 0.03
SRP9P49458 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.21■□□□□ 0.03
SRP9P49458 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.21■□□□□ 0.03
SRP9P49458 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 Z69720.1-201ENST00000601483 472 ntBASIC15.21■□□□□ 0.03
SRP9P49458 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SRP9P49458 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SRP9P49458 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.21■□□□□ 0.02
SRP9P49458 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP9P49458 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP9P49458 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP9P49458 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SRP9P49458 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.21■□□□□ 0.02
SRP9P49458 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
SRP9P49458 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SRP9P49458 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.2■□□□□ 0.02
SRP9P49458 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP9P49458 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP9P49458 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.2■□□□□ 0.02
SRP9P49458 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.2■□□□□ 0.02
SRP9P49458 AC092329.2-201ENST00000598402 547 ntBASIC15.2■□□□□ 0.02
SRP9P49458 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.2■□□□□ 0.02
SRP9P49458 LINC01451-201ENST00000623792 534 ntBASIC15.2■□□□□ 0.02
SRP9P49458 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SRP9P49458 AC092850.2-201ENST00000623821 2697 ntBASIC15.2■□□□□ 0.02
SRP9P49458 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms