Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK8P49336 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK8P49336 AC004461.1-201ENST00000412461 403 ntBASIC19.92■□□□□ 0.78
CDK8P49336 AL355306.1-201ENST00000415580 579 ntBASIC19.92■□□□□ 0.78
CDK8P49336 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 AL671277.1-201ENST00000429656 993 ntBASIC19.92■□□□□ 0.78
CDK8P49336 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK8P49336 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.92■□□□□ 0.78
CDK8P49336 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK8P49336 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.92■□□□□ 0.78
CDK8P49336 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.92■□□□□ 0.78
CDK8P49336 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDK8P49336 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDK8P49336 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 AC139713.2-201ENST00000641328 2723 ntBASIC19.92■□□□□ 0.78
CDK8P49336 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDK8P49336 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDK8P49336 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK8P49336 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK8P49336 AC131009.4-201ENST00000624048 1740 ntBASIC19.91■□□□□ 0.78
CDK8P49336 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK8P49336 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.91■□□□□ 0.78
CDK8P49336 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDK8P49336 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.91■□□□□ 0.78
CDK8P49336 AC022145.2-201ENST00000598203 171 ntBASIC19.91■□□□□ 0.78
CDK8P49336 AL009183.1-201ENST00000603760 355 ntBASIC19.91■□□□□ 0.78
CDK8P49336 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK8P49336 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDK8P49336 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDK8P49336 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.91■□□□□ 0.78
CDK8P49336 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.91■□□□□ 0.78
CDK8P49336 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDK8P49336 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDK8P49336 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK8P49336 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK8P49336 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.9■□□□□ 0.78
CDK8P49336 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDK8P49336 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDK8P49336 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 METTL21AP1-201ENST00000438852 635 ntBASIC19.9■□□□□ 0.78
CDK8P49336 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.9■□□□□ 0.78
CDK8P49336 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK8P49336 AC087641.1-201ENST00000557561 1021 ntBASIC19.9■□□□□ 0.78
CDK8P49336 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.9■□□□□ 0.78
CDK8P49336 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.9■□□□□ 0.78
CDK8P49336 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDK8P49336 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms