Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 LIN28AP1-201ENST00000429574 405 ntBASIC14.12□□□□□ -0.15
SNCAP37840 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.12□□□□□ -0.15
SNCAP37840 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SNCAP37840 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.12□□□□□ -0.15
SNCAP37840 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.12□□□□□ -0.15
SNCAP37840 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.12□□□□□ -0.15
SNCAP37840 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.12□□□□□ -0.15
SNCAP37840 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SNCAP37840 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 AC067930.6-201ENST00000623257 4947 ntBASIC14.11□□□□□ -0.15
SNCAP37840 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
SNCAP37840 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 AC104640.1-201ENST00000562617 2109 ntBASIC14.11□□□□□ -0.15
SNCAP37840 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 FAM8A6P-201ENST00000407496 1135 ntBASIC14.11□□□□□ -0.15
SNCAP37840 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 TSPY15P-201ENST00000457163 923 ntBASIC14.11□□□□□ -0.15
SNCAP37840 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SNCAP37840 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 GCSHP2-201ENST00000560971 527 ntBASIC14.11□□□□□ -0.15
SNCAP37840 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.11□□□□□ -0.15
SNCAP37840 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.11□□□□□ -0.15
SNCAP37840 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SNCAP37840 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 BX276092.7-203ENST00000637198 1536 ntBASIC14.1□□□□□ -0.15
SNCAP37840 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SNCAP37840 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SNCAP37840 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.1□□□□□ -0.15
SNCAP37840 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 TSPY12P-201ENST00000421279 868 ntBASIC14.1□□□□□ -0.15
SNCAP37840 KRT18P48-201ENST00000434763 852 ntBASIC14.1□□□□□ -0.15
SNCAP37840 ATP5G1P1-201ENST00000448724 379 ntBASIC14.1□□□□□ -0.15
SNCAP37840 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SNCAP37840 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.1□□□□□ -0.15
SNCAP37840 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.1□□□□□ -0.15
SNCAP37840 AC009154.2-201ENST00000621177 724 ntBASIC14.1□□□□□ -0.15
SNCAP37840 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms