Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 AC093503.3-201ENST00000624917 2352 ntBASIC20.85■□□□□ 0.93
PDE6BP35913 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDE6BP35913 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDE6BP35913 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE6BP35913 ARSEP1-201ENST00000420443 635 ntBASIC20.85■□□□□ 0.93
PDE6BP35913 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PDE6BP35913 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.85■□□□□ 0.93
PDE6BP35913 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.85■□□□□ 0.93
PDE6BP35913 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.85■□□□□ 0.93
PDE6BP35913 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.85■□□□□ 0.93
PDE6BP35913 MPDU1-223ENST00000582151 728 ntBASIC20.85■□□□□ 0.93
PDE6BP35913 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDE6BP35913 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.85■□□□□ 0.93
PDE6BP35913 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.84■□□□□ 0.93
PDE6BP35913 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.84■□□□□ 0.93
PDE6BP35913 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6BP35913 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6BP35913 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6BP35913 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 AC087289.5-201ENST00000586076 3175 ntBASIC20.84■□□□□ 0.93
PDE6BP35913 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.84■□□□□ 0.93
PDE6BP35913 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDE6BP35913 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 AL035456.1-201ENST00000456064 1369 ntBASIC20.84■□□□□ 0.93
PDE6BP35913 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDE6BP35913 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.83■□□□□ 0.93
PDE6BP35913 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE6BP35913 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PDE6BP35913 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDE6BP35913 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE6BP35913 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.83■□□□□ 0.93
PDE6BP35913 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.83■□□□□ 0.93
PDE6BP35913 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.83■□□□□ 0.93
PDE6BP35913 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.83■□□□□ 0.93
PDE6BP35913 KRT18P34-201ENST00000488218 1270 ntBASIC20.83■□□□□ 0.93
PDE6BP35913 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDE6BP35913 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.83■□□□□ 0.93
PDE6BP35913 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
PDE6BP35913 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.83■□□□□ 0.92
PDE6BP35913 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6BP35913 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6BP35913 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDE6BP35913 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PDE6BP35913 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6BP35913 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6BP35913 EGFEM1P-202ENST00000431685 1563 ntBASIC20.82■□□□□ 0.92
PDE6BP35913 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDE6BP35913 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6BP35913 U91328.1-201ENST00000437528 223 ntBASIC20.82■□□□□ 0.92
PDE6BP35913 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE6BP35913 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6BP35913 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6BP35913 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.82■□□□□ 0.92
PDE6BP35913 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.82■□□□□ 0.92
PDE6BP35913 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.82■□□□□ 0.92
PDE6BP35913 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.82■□□□□ 0.92
PDE6BP35913 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6BP35913 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.82■□□□□ 0.92
PDE6BP35913 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDE6BP35913 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.82■□□□□ 0.92
PDE6BP35913 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
PDE6BP35913 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 AC087499.5-201ENST00000452760 1342 ntBASIC20.81■□□□□ 0.92
PDE6BP35913 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDE6BP35913 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDE6BP35913 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms