Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
TM4SF1P30408 SLC25A6P5-201ENST00000435663 894 ntBASIC20.98■□□□□ 0.95
TM4SF1P30408 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.98■□□□□ 0.95
TM4SF1P30408 IGHV3-71-201ENST00000523324 359 ntBASIC20.98■□□□□ 0.95
TM4SF1P30408 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 AC010336.2-201ENST00000564226 506 ntBASIC20.98■□□□□ 0.95
TM4SF1P30408 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TM4SF1P30408 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM4SF1P30408 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.98■□□□□ 0.95
TM4SF1P30408 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TM4SF1P30408 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF1P30408 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TM4SF1P30408 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.97■□□□□ 0.95
TM4SF1P30408 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.97■□□□□ 0.95
TM4SF1P30408 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF1P30408 KRT18P34-201ENST00000488218 1270 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 RN7SL828P-201ENST00000607615 303 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 IGHV3-72-202ENST00000621503 303 ntBASIC20.97■□□□□ 0.95
TM4SF1P30408 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TM4SF1P30408 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM4SF1P30408 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
TM4SF1P30408 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TM4SF1P30408 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.96■□□□□ 0.95
TM4SF1P30408 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.96■□□□□ 0.95
TM4SF1P30408 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TM4SF1P30408 AC098614.1-201ENST00000368528 745 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 HLA-H-201ENST00000383620 1096 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 DGCR5-201ENST00000399539 862 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 GPR53P-205ENST00000457298 1084 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.96■□□□□ 0.95
TM4SF1P30408 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 HILS1-202ENST00000545329 423 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 BANF1P1-201ENST00000553684 263 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF1P30408 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.96■□□□□ 0.95
TM4SF1P30408 AC140912.1-201ENST00000577171 1054 ntBASIC20.96■□□□□ 0.95
TM4SF1P30408 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.96■□□□□ 0.95
TM4SF1P30408 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TM4SF1P30408 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.96■□□□□ 0.95
TM4SF1P30408 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.96■□□□□ 0.95
TM4SF1P30408 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.96■□□□□ 0.95
TM4SF1P30408 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.96■□□□□ 0.95
TM4SF1P30408 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM4SF1P30408 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.95■□□□□ 0.94
TM4SF1P30408 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM4SF1P30408 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms