Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE4AP27815 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PDE4AP27815 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PDE4AP27815 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDE4AP27815 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC21.53■■□□□ 1.04
PDE4AP27815 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.53■■□□□ 1.04
PDE4AP27815 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE4AP27815 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 AL353593.2-201ENST00000602529 1483 ntBASIC21.52■■□□□ 1.04
PDE4AP27815 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE4AP27815 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE4AP27815 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PDE4AP27815 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 AC024909.3-201ENST00000611513 2257 ntBASIC21.52■■□□□ 1.04
PDE4AP27815 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 AC011840.4-201ENST00000578471 627 ntBASIC21.52■■□□□ 1.04
PDE4AP27815 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 AC116407.4-201ENST00000623319 1061 ntBASIC21.52■■□□□ 1.04
PDE4AP27815 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE4AP27815 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE4AP27815 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PDE4AP27815 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC21.52■■□□□ 1.04
PDE4AP27815 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PDE4AP27815 BANP-201ENST00000286122 2368 ntTSL 5 BASIC21.52■■□□□ 1.04
PDE4AP27815 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.52■■□□□ 1.03
PDE4AP27815 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC21.52■■□□□ 1.03
PDE4AP27815 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.51■■□□□ 1.03
PDE4AP27815 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 CHCHD2P8-201ENST00000429873 447 ntBASIC21.51■■□□□ 1.03
PDE4AP27815 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PDE4AP27815 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 AL513477.1-201ENST00000602865 2407 ntBASIC21.51■■□□□ 1.03
PDE4AP27815 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
PDE4AP27815 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PDE4AP27815 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PDE4AP27815 AC132938.5-201ENST00000624980 1813 ntBASIC21.5■■□□□ 1.03
PDE4AP27815 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
PDE4AP27815 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDE4AP27815 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 FAM220CP-201ENST00000395253 831 ntBASIC21.5■■□□□ 1.03
PDE4AP27815 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.5■■□□□ 1.03
PDE4AP27815 IGHV3-52-201ENST00000519770 353 ntBASIC21.5■■□□□ 1.03
PDE4AP27815 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PDE4AP27815 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC21.5■■□□□ 1.03
PDE4AP27815 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PDE4AP27815 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.5■■□□□ 1.03
PDE4AP27815 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PDE4AP27815 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms