Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 MYCLP1-201ENST00000372451 1075 ntBASIC16.85■□□□□ 0.29
VARSP26640 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 POM121L3P-201ENST00000419331 1163 ntBASIC16.85■□□□□ 0.29
VARSP26640 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 SAPCD2P3-201ENST00000455031 850 ntBASIC16.85■□□□□ 0.29
VARSP26640 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.85■□□□□ 0.29
VARSP26640 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.85■□□□□ 0.29
VARSP26640 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.85■□□□□ 0.29
VARSP26640 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.85■□□□□ 0.29
VARSP26640 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.85■□□□□ 0.29
VARSP26640 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.85■□□□□ 0.29
VARSP26640 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VARSP26640 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
VARSP26640 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.84■□□□□ 0.29
VARSP26640 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
VARSP26640 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.84■□□□□ 0.29
VARSP26640 MIR5100-201ENST00000579544 119 ntBASIC16.84■□□□□ 0.29
VARSP26640 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.84■□□□□ 0.29
VARSP26640 STK25P1-201ENST00000585406 838 ntBASIC16.84■□□□□ 0.29
VARSP26640 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.84■□□□□ 0.29
VARSP26640 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 AD001527.2-201ENST00000622994 785 ntBASIC16.84■□□□□ 0.29
VARSP26640 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VARSP26640 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 AC132938.5-201ENST00000624980 1813 ntBASIC16.84■□□□□ 0.29
VARSP26640 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VARSP26640 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VARSP26640 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
VARSP26640 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VARSP26640 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VARSP26640 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VARSP26640 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.83■□□□□ 0.28
VARSP26640 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.83■□□□□ 0.28
VARSP26640 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
VARSP26640 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.83■□□□□ 0.28
VARSP26640 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.83■□□□□ 0.28
VARSP26640 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VARSP26640 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms