Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CD40P25942 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.7□□□□□ -0.06
CD40P25942 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.7□□□□□ -0.06
CD40P25942 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.7□□□□□ -0.06
CD40P25942 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.7□□□□□ -0.06
CD40P25942 AC068137.2-201ENST00000605408 478 ntBASIC14.7□□□□□ -0.06
CD40P25942 REXO1L3P-201ENST00000622202 1288 ntBASIC14.7□□□□□ -0.06
CD40P25942 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.7□□□□□ -0.06
CD40P25942 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.7□□□□□ -0.06
CD40P25942 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD40P25942 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.69□□□□□ -0.06
CD40P25942 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.69□□□□□ -0.06
CD40P25942 FAM58CP-201ENST00000435741 640 ntBASIC14.69□□□□□ -0.06
CD40P25942 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.69□□□□□ -0.06
CD40P25942 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 AP001160.2-201ENST00000596071 487 ntBASIC14.69□□□□□ -0.06
CD40P25942 AL645728.2-201ENST00000641974 660 ntBASIC14.69□□□□□ -0.06
CD40P25942 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD40P25942 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD40P25942 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CD40P25942 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 ELL2P1-201ENST00000413990 1906 ntBASIC14.68□□□□□ -0.06
CD40P25942 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD40P25942 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.68□□□□□ -0.06
CD40P25942 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.68□□□□□ -0.06
CD40P25942 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 AP006288.1-201ENST00000446065 395 ntBASIC14.68□□□□□ -0.06
CD40P25942 CEND1P1-201ENST00000451006 455 ntBASIC14.68□□□□□ -0.06
CD40P25942 AC092183.1-201ENST00000469884 875 ntBASIC14.68□□□□□ -0.06
CD40P25942 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 AC005412.3-201ENST00000580309 715 ntBASIC14.68□□□□□ -0.06
CD40P25942 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.68□□□□□ -0.06
CD40P25942 AC091812.2-201ENST00000619081 385 ntBASIC14.68□□□□□ -0.06
CD40P25942 CROCCP2-202ENST00000412962 2773 ntBASIC14.68□□□□□ -0.06
CD40P25942 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CD40P25942 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CD40P25942 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD40P25942 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms