Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 AC098850.1-201ENST00000419919 790 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR2AP24928 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 FRMD8P1-201ENST00000440433 1524 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
POLR2AP24928 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.75■□□□□ 0.75
POLR2AP24928 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
POLR2AP24928 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 AL023806.1-201ENST00000603994 1649 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
POLR2AP24928 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR2AP24928 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR2AP24928 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR2AP24928 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR2AP24928 AC007389.4-201ENST00000454674 793 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR2AP24928 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.75■□□□□ 0.75
POLR2AP24928 MIR4259-201ENST00000584466 101 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.75■□□□□ 0.75
POLR2AP24928 AL589739.1-201ENST00000607720 493 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR2AP24928 SPTSSB-204ENST00000617024 1292 ntBASIC19.75■□□□□ 0.75
POLR2AP24928 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.75■□□□□ 0.75
POLR2AP24928 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR2AP24928 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
POLR2AP24928 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.74■□□□□ 0.75
POLR2AP24928 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 TTTY23B-201ENST00000442790 549 ntBASIC19.74■□□□□ 0.75
POLR2AP24928 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2AP24928 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2AP24928 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
POLR2AP24928 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
POLR2AP24928 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
POLR2AP24928 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
POLR2AP24928 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.74■□□□□ 0.75
POLR2AP24928 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
POLR2AP24928 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
POLR2AP24928 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.74■□□□□ 0.75
POLR2AP24928 AL162274.1-201ENST00000617191 1098 ntBASIC19.74■□□□□ 0.75
POLR2AP24928 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
POLR2AP24928 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.73■□□□□ 0.75
POLR2AP24928 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR2AP24928 AC098818.2-201ENST00000564925 2320 ntBASIC19.73■□□□□ 0.75
POLR2AP24928 AC073439.1-201ENST00000624121 1774 ntBASIC19.73■□□□□ 0.75
POLR2AP24928 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.73■□□□□ 0.75
POLR2AP24928 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.73■□□□□ 0.75
POLR2AP24928 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
POLR2AP24928 AC044860.1-202ENST00000559481 777 ntBASIC19.73■□□□□ 0.75
POLR2AP24928 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.73■□□□□ 0.75
POLR2AP24928 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.73■□□□□ 0.75
POLR2AP24928 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR2AP24928 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
POLR2AP24928 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.73■□□□□ 0.75
POLR2AP24928 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
POLR2AP24928 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.72■□□□□ 0.75
POLR2AP24928 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
POLR2AP24928 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms