Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 FAM197Y8-203ENST00000450145 560 ntBASIC17.25■□□□□ 0.35
HLA-DPA1P20036 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 OR7E14P-202ENST00000530490 1290 ntBASIC17.25■□□□□ 0.35
HLA-DPA1P20036 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 AC022211.2-201ENST00000585075 2527 ntBASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DPA1P20036 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 KRT18P67-201ENST00000432816 1264 ntBASIC17.24■□□□□ 0.35
HLA-DPA1P20036 RPS2P1-201ENST00000434010 821 ntBASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AC018712.1-201ENST00000455767 687 ntBASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AF186996.4-201ENST00000467186 377 ntBASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AC243591.1-201ENST00000452967 1364 ntBASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DPA1P20036 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
HLA-DPA1P20036 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DPA1P20036 ELK2BP-201ENST00000415014 1224 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms