Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.77■□□□□ 0.76
ERCC3P19447 ACTL9-202ENST00000612068 1252 ntBASIC19.77■□□□□ 0.76
ERCC3P19447 AC105339.1-204ENST00000636249 355 ntBASIC19.77■□□□□ 0.76
ERCC3P19447 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC3P19447 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC3P19447 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC3P19447 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.77■□□□□ 0.76
ERCC3P19447 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC3P19447 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC3P19447 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC3P19447 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.76■□□□□ 0.75
ERCC3P19447 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
ERCC3P19447 AC004461.1-201ENST00000412461 403 ntBASIC19.76■□□□□ 0.75
ERCC3P19447 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.76■□□□□ 0.75
ERCC3P19447 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 PAWRP1-201ENST00000451083 565 ntBASIC19.76■□□□□ 0.75
ERCC3P19447 MIR3197-201ENST00000582241 73 ntBASIC19.76■□□□□ 0.75
ERCC3P19447 AC004835.2-201ENST00000603762 682 ntBASIC19.76■□□□□ 0.75
ERCC3P19447 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.76■□□□□ 0.75
ERCC3P19447 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
ERCC3P19447 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC3P19447 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.76■□□□□ 0.75
ERCC3P19447 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC3P19447 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 AC006116.8-202ENST00000587620 1550 ntBASIC19.75■□□□□ 0.75
ERCC3P19447 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ERCC3P19447 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 AL513480.1-201ENST00000451731 511 ntBASIC19.75■□□□□ 0.75
ERCC3P19447 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.75■□□□□ 0.75
ERCC3P19447 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.75■□□□□ 0.75
ERCC3P19447 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.75■□□□□ 0.75
ERCC3P19447 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.75■□□□□ 0.75
ERCC3P19447 REXO1L3P-201ENST00000622202 1288 ntBASIC19.75■□□□□ 0.75
ERCC3P19447 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC3P19447 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC3P19447 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC3P19447 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC3P19447 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC3P19447 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC3P19447 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.74■□□□□ 0.75
ERCC3P19447 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.74■□□□□ 0.75
ERCC3P19447 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 SLC25A6P2-201ENST00000497974 877 ntBASIC19.74■□□□□ 0.75
ERCC3P19447 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC3P19447 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC3P19447 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC3P19447 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ERCC3P19447 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC3P19447 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ERCC3P19447 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC3P19447 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC3P19447 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC3P19447 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms