Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
NCK1P16333 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 AL645728.1-201ENST00000366221 2101 ntBASIC16.19■□□□□ 0.18
NCK1P16333 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 AL391256.1-201ENST00000443260 1855 ntBASIC16.19■□□□□ 0.18
NCK1P16333 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 AC022188.1-201ENST00000620960 1664 ntBASIC16.19■□□□□ 0.18
NCK1P16333 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.19■□□□□ 0.18
NCK1P16333 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.19■□□□□ 0.18
NCK1P16333 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NCK1P16333 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.19■□□□□ 0.18
NCK1P16333 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NCK1P16333 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NCK1P16333 KRT18P22-201ENST00000402024 1347 ntBASIC16.19■□□□□ 0.18
NCK1P16333 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.18■□□□□ 0.18
NCK1P16333 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NCK1P16333 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.18■□□□□ 0.18
NCK1P16333 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 AC005332.3-201ENST00000589904 676 ntBASIC16.18■□□□□ 0.18
NCK1P16333 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
NCK1P16333 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
NCK1P16333 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NCK1P16333 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NCK1P16333 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NCK1P16333 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NCK1P16333 MIR662-201ENST00000384847 95 ntBASIC16.17■□□□□ 0.18
NCK1P16333 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NCK1P16333 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms