Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD8P13378 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXD8P13378 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXD8P13378 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXD8P13378 MIR943-201ENST00000401286 94 ntBASIC18.66■□□□□ 0.58
HOXD8P13378 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD8P13378 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD8P13378 AC093214.1-201ENST00000511688 1107 ntBASIC18.66■□□□□ 0.58
HOXD8P13378 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXD8P13378 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXD8P13378 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD8P13378 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.66■□□□□ 0.58
HOXD8P13378 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD8P13378 AL158211.3-201ENST00000607385 239 ntBASIC18.66■□□□□ 0.58
HOXD8P13378 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXD8P13378 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 NOC2LP2-201ENST00000407594 1944 ntBASIC18.66■□□□□ 0.58
HOXD8P13378 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.66■□□□□ 0.58
HOXD8P13378 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXD8P13378 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXD8P13378 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXD8P13378 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXD8P13378 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD8P13378 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.65■□□□□ 0.58
HOXD8P13378 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD8P13378 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXD8P13378 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD8P13378 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD8P13378 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 MIR4745-201ENST00000577608 62 ntBASIC18.65■□□□□ 0.58
HOXD8P13378 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXD8P13378 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXD8P13378 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXD8P13378 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
HOXD8P13378 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
HOXD8P13378 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
HOXD8P13378 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HOXD8P13378 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXD8P13378 BASP1P1-201ENST00000430708 665 ntBASIC18.64■□□□□ 0.57
HOXD8P13378 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD8P13378 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.64■□□□□ 0.57
HOXD8P13378 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXD8P13378 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD8P13378 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.64■□□□□ 0.57
HOXD8P13378 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 AC013467.2-201ENST00000605472 835 ntBASIC18.64■□□□□ 0.57
HOXD8P13378 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXD8P13378 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXD8P13378 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.64■□□□□ 0.57
HOXD8P13378 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HOXD8P13378 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXD8P13378 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
HOXD8P13378 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD8P13378 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD8P13378 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXD8P13378 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXD8P13378 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms