Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCL4P13236 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCL4P13236 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CCL4P13236 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.03■□□□□ 0.16
CCL4P13236 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
CCL4P13236 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 TOP3BP1-201ENST00000420768 1380 ntBASIC16.02■□□□□ 0.16
CCL4P13236 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.02■□□□□ 0.16
CCL4P13236 FO538757.1-201ENST00000623083 1397 ntBASIC16.02■□□□□ 0.16
CCL4P13236 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCL4P13236 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CCL4P13236 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CCL4P13236 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.02■□□□□ 0.16
CCL4P13236 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCL4P13236 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.02■□□□□ 0.16
CCL4P13236 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.02■□□□□ 0.16
CCL4P13236 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.02■□□□□ 0.16
CCL4P13236 AL031055.1-201ENST00000606362 631 ntBASIC16.02■□□□□ 0.16
CCL4P13236 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CCL4P13236 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CCL4P13236 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCL4P13236 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.02■□□□□ 0.15
CCL4P13236 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CCL4P13236 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCL4P13236 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCL4P13236 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CCL4P13236 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.02■□□□□ 0.15
CCL4P13236 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.01■□□□□ 0.15
CCL4P13236 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCL4P13236 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 SLC25A1P3-201ENST00000395415 828 ntBASIC16.01■□□□□ 0.15
CCL4P13236 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCL4P13236 TREML5P-201ENST00000421694 576 ntBASIC16.01■□□□□ 0.15
CCL4P13236 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.01■□□□□ 0.15
CCL4P13236 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCL4P13236 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.01■□□□□ 0.15
CCL4P13236 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCL4P13236 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.01■□□□□ 0.15
CCL4P13236 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 AC084121.4-201ENST00000641598 221 ntBASIC16.01■□□□□ 0.15
CCL4P13236 AF228730.8-201ENST00000642140 221 ntBASIC16.01■□□□□ 0.15
CCL4P13236 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.01■□□□□ 0.15
CCL4P13236 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 AC093525.9-201ENST00000624961 1746 ntBASIC16.01■□□□□ 0.15
CCL4P13236 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCL4P13236 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCL4P13236 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.01■□□□□ 0.15
CCL4P13236 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCL4P13236 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCL4P13236 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CCL4P13236 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 GNAS-203ENST00000306120 1878 ntBASIC16■□□□□ 0.15
CCL4P13236 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16■□□□□ 0.15
CCL4P13236 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16■□□□□ 0.15
CCL4P13236 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CCL4P13236 BAD-202ENST00000394531 631 ntTSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms