Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL11A1P12107 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 AC120498.9-201ENST00000339021 3867 ntBASIC19.17■□□□□ 0.66
COL11A1P12107 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL11A1P12107 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.17■□□□□ 0.66
COL11A1P12107 IGHV3-62-201ENST00000520057 340 ntBASIC19.17■□□□□ 0.66
COL11A1P12107 AL590560.3-201ENST00000623350 461 ntBASIC19.17■□□□□ 0.66
COL11A1P12107 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL11A1P12107 AC067852.2-201ENST00000590513 2313 ntBASIC19.17■□□□□ 0.66
COL11A1P12107 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
COL11A1P12107 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL11A1P12107 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COL11A1P12107 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL11A1P12107 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.16■□□□□ 0.66
COL11A1P12107 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.16■□□□□ 0.66
COL11A1P12107 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
COL11A1P12107 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL11A1P12107 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.16■□□□□ 0.66
COL11A1P12107 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL11A1P12107 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.16■□□□□ 0.66
COL11A1P12107 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL11A1P12107 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.16■□□□□ 0.66
COL11A1P12107 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL11A1P12107 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 TUBB8P12-201ENST00000308911 1335 ntBASIC19.15■□□□□ 0.66
COL11A1P12107 TUBB7P-202ENST00000428444 1305 ntBASIC19.15■□□□□ 0.66
COL11A1P12107 TUBB8P7-204ENST00000567960 1332 ntBASIC19.15■□□□□ 0.66
COL11A1P12107 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL11A1P12107 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.15■□□□□ 0.66
COL11A1P12107 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.15■□□□□ 0.66
COL11A1P12107 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.15■□□□□ 0.66
COL11A1P12107 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL11A1P12107 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.15■□□□□ 0.66
COL11A1P12107 IGHV3-42-201ENST00000520410 361 ntBASIC19.15■□□□□ 0.66
COL11A1P12107 AL138828.2-201ENST00000615812 383 ntBASIC19.15■□□□□ 0.66
COL11A1P12107 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
COL11A1P12107 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL11A1P12107 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL11A1P12107 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.15■□□□□ 0.66
COL11A1P12107 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL11A1P12107 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL11A1P12107 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL11A1P12107 AC007613.1-201ENST00000572811 2597 ntBASIC19.14■□□□□ 0.66
COL11A1P12107 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL11A1P12107 AC092053.1-201ENST00000605787 1936 ntBASIC19.14■□□□□ 0.66
COL11A1P12107 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL11A1P12107 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.14■□□□□ 0.65
COL11A1P12107 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.14■□□□□ 0.65
COL11A1P12107 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.14■□□□□ 0.65
COL11A1P12107 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.14■□□□□ 0.65
COL11A1P12107 LINC02560-201ENST00000596379 459 ntBASIC19.14■□□□□ 0.65
COL11A1P12107 AC004840.1-201ENST00000636359 365 ntBASIC19.14■□□□□ 0.65
COL11A1P12107 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
COL11A1P12107 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.14■□□□□ 0.65
COL11A1P12107 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 AL671710.1-201ENST00000610245 2349 ntBASIC19.14■□□□□ 0.65
COL11A1P12107 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.14■□□□□ 0.65
COL11A1P12107 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.14■□□□□ 0.65
COL11A1P12107 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.14■□□□□ 0.65
COL11A1P12107 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL11A1P12107 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.14■□□□□ 0.65
COL11A1P12107 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL11A1P12107 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms