Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 AC020916.1-201ENST00000587762 1774 ntBASIC19.8■□□□□ 0.76
CALM3P0DP25 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.8■□□□□ 0.76
CALM3P0DP25 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CALM3P0DP25 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CALM3P0DP25 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.8■□□□□ 0.76
CALM3P0DP25 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.8■□□□□ 0.76
CALM3P0DP25 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.8■□□□□ 0.76
CALM3P0DP25 AC106730.1-201ENST00000566722 1090 ntBASIC19.8■□□□□ 0.76
CALM3P0DP25 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CALM3P0DP25 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.8■□□□□ 0.76
CALM3P0DP25 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.8■□□□□ 0.76
CALM3P0DP25 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.8■□□□□ 0.76
CALM3P0DP25 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CALM3P0DP25 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.79■□□□□ 0.76
CALM3P0DP25 AC107918.2-201ENST00000530817 355 ntBASIC19.79■□□□□ 0.76
CALM3P0DP25 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.79■□□□□ 0.76
CALM3P0DP25 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.79■□□□□ 0.76
CALM3P0DP25 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
CALM3P0DP25 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CALM3P0DP25 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.78■□□□□ 0.76
CALM3P0DP25 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.78■□□□□ 0.76
CALM3P0DP25 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 SLC25A1P1-201ENST00000528351 927 ntBASIC19.78■□□□□ 0.76
CALM3P0DP25 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.78■□□□□ 0.76
CALM3P0DP25 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.78■□□□□ 0.76
CALM3P0DP25 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CALM3P0DP25 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CALM3P0DP25 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.78■□□□□ 0.76
CALM3P0DP25 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
CALM3P0DP25 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.78■□□□□ 0.76
CALM3P0DP25 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CALM3P0DP25 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CALM3P0DP25 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms