Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC6P09630 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 AL512638.1-201ENST00000457493 794 ntBASIC19.17■□□□□ 0.66
HOXC6P09630 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC6P09630 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC6P09630 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC6P09630 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC6P09630 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HOXC6P09630 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC6P09630 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.16■□□□□ 0.66
HOXC6P09630 CRB3P1-201ENST00000449338 276 ntBASIC19.16■□□□□ 0.66
HOXC6P09630 AC004890.2-204ENST00000481968 304 ntBASIC19.16■□□□□ 0.66
HOXC6P09630 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 SLC22A20-204ENST00000530038 1673 ntBASIC19.16■□□□□ 0.66
HOXC6P09630 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 TOP3BP1-201ENST00000420768 1380 ntBASIC19.16■□□□□ 0.66
HOXC6P09630 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC6P09630 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC6P09630 AC012317.2-201ENST00000623305 2251 ntBASIC19.16■□□□□ 0.66
HOXC6P09630 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 GK-202ENST00000378941 458 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXC6P09630 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXC6P09630 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.15■□□□□ 0.66
HOXC6P09630 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.15■□□□□ 0.66
HOXC6P09630 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
HOXC6P09630 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC6P09630 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC6P09630 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
HOXC6P09630 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HOXC6P09630 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HOXC6P09630 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC6P09630 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
HOXC6P09630 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC6P09630 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.14■□□□□ 0.65
HOXC6P09630 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.14■□□□□ 0.65
HOXC6P09630 AC241585.1-201ENST00000433527 519 ntBASIC19.14■□□□□ 0.65
HOXC6P09630 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.14■□□□□ 0.65
HOXC6P09630 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
HOXC6P09630 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.14■□□□□ 0.65
HOXC6P09630 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC6P09630 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC6P09630 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HOXC6P09630 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
HOXC6P09630 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.14■□□□□ 0.65
HOXC6P09630 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms