Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.7■□□□□ 0.58
CLTAP09496 AC080080.1-201ENST00000625121 2420 ntBASIC18.7■□□□□ 0.58
CLTAP09496 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLTAP09496 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 AC108860.2-201ENST00000562760 2183 ntBASIC18.69■□□□□ 0.58
CLTAP09496 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLTAP09496 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLTAP09496 PMS2P1-201ENST00000431037 1228 ntBASIC18.69■□□□□ 0.58
CLTAP09496 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 AC108073.2-201ENST00000464002 357 ntBASIC18.69■□□□□ 0.58
CLTAP09496 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLTAP09496 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLTAP09496 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLTAP09496 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLTAP09496 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.68■□□□□ 0.58
CLTAP09496 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 KRT18P58-201ENST00000527480 1120 ntBASIC18.68■□□□□ 0.58
CLTAP09496 AL671883.3-201ENST00000603274 991 ntBASIC18.68■□□□□ 0.58
CLTAP09496 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CLTAP09496 AC027601.4-201ENST00000611259 610 ntBASIC18.68■□□□□ 0.58
CLTAP09496 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLTAP09496 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLTAP09496 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CLTAP09496 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 PI4KAP1-204ENST00000612579 1703 ntBASIC18.68■□□□□ 0.58
CLTAP09496 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLTAP09496 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLTAP09496 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLTAP09496 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.68■□□□□ 0.58
CLTAP09496 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLTAP09496 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.67■□□□□ 0.58
CLTAP09496 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.67■□□□□ 0.58
CLTAP09496 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLTAP09496 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLTAP09496 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.67■□□□□ 0.58
CLTAP09496 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms