Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.28■□□□□ 0.52
C4BPAP04003 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
C4BPAP04003 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 IGLL3P-201ENST00000412472 434 ntBASIC18.28■□□□□ 0.52
C4BPAP04003 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 HCG4B-203ENST00000450128 991 ntBASIC18.28■□□□□ 0.52
C4BPAP04003 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.28■□□□□ 0.52
C4BPAP04003 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 AC106730.1-201ENST00000566722 1090 ntBASIC18.28■□□□□ 0.52
C4BPAP04003 MIR4751-201ENST00000578027 74 ntBASIC18.28■□□□□ 0.52
C4BPAP04003 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.28■□□□□ 0.52
C4BPAP04003 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.28■□□□□ 0.52
C4BPAP04003 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4BPAP04003 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.28■□□□□ 0.52
C4BPAP04003 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C4BPAP04003 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.27■□□□□ 0.52
C4BPAP04003 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.27■□□□□ 0.52
C4BPAP04003 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.27■□□□□ 0.52
C4BPAP04003 CRYGEP-201ENST00000412192 528 ntBASIC18.27■□□□□ 0.52
C4BPAP04003 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.27■□□□□ 0.52
C4BPAP04003 FAM185BP-201ENST00000443595 716 ntBASIC18.27■□□□□ 0.52
C4BPAP04003 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
C4BPAP04003 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.27■□□□□ 0.52
C4BPAP04003 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.27■□□□□ 0.52
C4BPAP04003 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.27■□□□□ 0.52
C4BPAP04003 AC078925.2-201ENST00000624013 1973 ntBASIC18.27■□□□□ 0.52
C4BPAP04003 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4BPAP04003 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C4BPAP04003 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.27■□□□□ 0.51
C4BPAP04003 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
C4BPAP04003 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
C4BPAP04003 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.51
C4BPAP04003 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C4BPAP04003 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.27■□□□□ 0.51
C4BPAP04003 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.27■□□□□ 0.51
C4BPAP04003 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C4BPAP04003 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
C4BPAP04003 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.26■□□□□ 0.51
C4BPAP04003 MIR4492-201ENST00000581627 80 ntBASIC18.26■□□□□ 0.51
C4BPAP04003 MPDU1-223ENST00000582151 728 ntBASIC18.26■□□□□ 0.51
C4BPAP04003 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 ACTL9-202ENST00000612068 1252 ntBASIC18.26■□□□□ 0.51
C4BPAP04003 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.26■□□□□ 0.51
C4BPAP04003 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 AGGF1P2-201ENST00000426656 2106 ntBASIC18.26■□□□□ 0.51
C4BPAP04003 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
C4BPAP04003 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C4BPAP04003 SLC22A20-204ENST00000530038 1673 ntBASIC18.25■□□□□ 0.51
C4BPAP04003 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C4BPAP04003 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms