Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHRNA1P02708 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 FO538757.1-201ENST00000623083 1397 ntBASIC18.44■□□□□ 0.54
CHRNA1P02708 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.44■□□□□ 0.54
CHRNA1P02708 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRNA1P02708 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC125807.1-201ENST00000483097 614 ntBASIC18.44■□□□□ 0.54
CHRNA1P02708 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 AP000842.3-202ENST00000569238 1080 ntBASIC18.44■□□□□ 0.54
CHRNA1P02708 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRNA1P02708 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.44■□□□□ 0.54
CHRNA1P02708 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC027307.2-201ENST00000591252 911 ntBASIC18.44■□□□□ 0.54
CHRNA1P02708 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CHRNA1P02708 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRNA1P02708 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHRNA1P02708 AC016027.1-202ENST00000607927 1699 ntBASIC18.44■□□□□ 0.54
CHRNA1P02708 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.44■□□□□ 0.54
CHRNA1P02708 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHRNA1P02708 GNAS-203ENST00000306120 1878 ntBASIC18.43■□□□□ 0.54
CHRNA1P02708 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA1P02708 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CHRNA1P02708 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 AC020763.4-201ENST00000623414 4170 ntBASIC18.43■□□□□ 0.54
CHRNA1P02708 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA1P02708 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.43■□□□□ 0.54
CHRNA1P02708 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.43■□□□□ 0.54
CHRNA1P02708 AC140878.1-201ENST00000565277 250 ntBASIC18.43■□□□□ 0.54
CHRNA1P02708 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHRNA1P02708 AL138918.1-201ENST00000568306 659 ntBASIC18.43■□□□□ 0.54
CHRNA1P02708 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CHRNA1P02708 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA1P02708 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.43■□□□□ 0.54
CHRNA1P02708 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CHRNA1P02708 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.43■□□□□ 0.54
CHRNA1P02708 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRNA1P02708 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CHRNA1P02708 AC134043.2-201ENST00000624206 2238 ntBASIC18.42■□□□□ 0.54
CHRNA1P02708 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 TREML5P-201ENST00000421694 576 ntBASIC18.42■□□□□ 0.54
CHRNA1P02708 BASP1P1-201ENST00000430708 665 ntBASIC18.42■□□□□ 0.54
CHRNA1P02708 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CHRNA1P02708 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.42■□□□□ 0.54
CHRNA1P02708 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.42■□□□□ 0.54
CHRNA1P02708 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.42■□□□□ 0.54
CHRNA1P02708 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.42■□□□□ 0.54
CHRNA1P02708 ALG1L8P-201ENST00000533887 760 ntBASIC18.42■□□□□ 0.54
CHRNA1P02708 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms