Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
APOC3P02656 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC3P02656 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.72□□□□□ -0.21
APOC3P02656 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 AP005117.1-202ENST00000581724 1908 ntBASIC13.72□□□□□ -0.21
APOC3P02656 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOC3P02656 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.72□□□□□ -0.21
APOC3P02656 AL359183.1-201ENST00000623796 2132 ntBASIC13.72□□□□□ -0.21
APOC3P02656 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.72□□□□□ -0.21
APOC3P02656 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.71□□□□□ -0.21
APOC3P02656 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
APOC3P02656 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.71□□□□□ -0.21
APOC3P02656 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.71□□□□□ -0.21
APOC3P02656 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.71□□□□□ -0.21
APOC3P02656 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.71□□□□□ -0.21
APOC3P02656 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 AC009102.3-201ENST00000623118 1491 ntBASIC13.71□□□□□ -0.21
APOC3P02656 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOC3P02656 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APOC3P02656 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOC3P02656 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.71□□□□□ -0.22
APOC3P02656 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOC3P02656 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms