Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC034236.2-201ENST00000606662 1610 ntBASIC16.19■□□□□ 0.18
CLPTM1O96005 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPTM1O96005 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.19■□□□□ 0.18
CLPTM1O96005 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 AC010203.1-204ENST00000548782 407 ntBASIC16.19■□□□□ 0.18
CLPTM1O96005 AC010653.2-201ENST00000623505 997 ntBASIC16.19■□□□□ 0.18
CLPTM1O96005 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.19■□□□□ 0.18
CLPTM1O96005 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.19■□□□□ 0.18
CLPTM1O96005 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLPTM1O96005 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CLPTM1O96005 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.19■□□□□ 0.18
CLPTM1O96005 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLPTM1O96005 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLPTM1O96005 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CLPTM1O96005 RCN1P1-201ENST00000400413 996 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 HMGA1P5-201ENST00000412453 271 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 AC113347.1-201ENST00000413321 391 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 AL137013.1-201ENST00000432946 1228 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.18■□□□□ 0.18
CLPTM1O96005 KRT18P57-201ENST00000443599 1254 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.18■□□□□ 0.18
CLPTM1O96005 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.18■□□□□ 0.18
CLPTM1O96005 LINC02012-201ENST00000608206 1725 ntBASIC16.18■□□□□ 0.18
CLPTM1O96005 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLPTM1O96005 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLPTM1O96005 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.17■□□□□ 0.18
CLPTM1O96005 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLPTM1O96005 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.17■□□□□ 0.18
CLPTM1O96005 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPTM1O96005 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLPTM1O96005 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.17■□□□□ 0.18
CLPTM1O96005 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.17■□□□□ 0.18
CLPTM1O96005 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms