Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LGR5O75473 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.86■□□□□ 0.61
LGR5O75473 AL671277.1-201ENST00000429656 993 ntBASIC18.86■□□□□ 0.61
LGR5O75473 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
LGR5O75473 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.86■□□□□ 0.61
LGR5O75473 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.86■□□□□ 0.61
LGR5O75473 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.86■□□□□ 0.61
LGR5O75473 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
LGR5O75473 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 AL009183.1-201ENST00000603760 355 ntBASIC18.86■□□□□ 0.61
LGR5O75473 AC026120.1-201ENST00000611536 926 ntBASIC18.86■□□□□ 0.61
LGR5O75473 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 AC093512.1-201ENST00000617969 520 ntBASIC18.86■□□□□ 0.61
LGR5O75473 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.86■□□□□ 0.61
LGR5O75473 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LGR5O75473 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LGR5O75473 LINC02012-201ENST00000608206 1725 ntBASIC18.86■□□□□ 0.61
LGR5O75473 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.85■□□□□ 0.61
LGR5O75473 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.85■□□□□ 0.61
LGR5O75473 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LGR5O75473 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LGR5O75473 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
LGR5O75473 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LGR5O75473 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.85■□□□□ 0.61
LGR5O75473 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.85■□□□□ 0.61
LGR5O75473 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.85■□□□□ 0.61
LGR5O75473 FAM86C2P-203ENST00000528684 1004 ntBASIC18.85■□□□□ 0.61
LGR5O75473 AC109635.5-201ENST00000533593 962 ntBASIC18.85■□□□□ 0.61
LGR5O75473 AC025678.2-201ENST00000562061 970 ntBASIC18.85■□□□□ 0.61
LGR5O75473 MPDU1-223ENST00000582151 728 ntBASIC18.85■□□□□ 0.61
LGR5O75473 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.85■□□□□ 0.61
LGR5O75473 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LGR5O75473 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LGR5O75473 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LGR5O75473 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.84■□□□□ 0.61
LGR5O75473 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 KRT8P49-201ENST00000604166 1432 ntBASIC18.84■□□□□ 0.61
LGR5O75473 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.84■□□□□ 0.61
LGR5O75473 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.84■□□□□ 0.61
LGR5O75473 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LGR5O75473 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LGR5O75473 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.84■□□□□ 0.61
LGR5O75473 AC023141.5-201ENST00000458585 616 ntBASIC18.84■□□□□ 0.61
LGR5O75473 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LGR5O75473 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.84■□□□□ 0.61
LGR5O75473 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.84■□□□□ 0.61
LGR5O75473 KRT8P48-201ENST00000515599 1220 ntBASIC18.84■□□□□ 0.61
LGR5O75473 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.84■□□□□ 0.61
LGR5O75473 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.84■□□□□ 0.61
LGR5O75473 AC124947.2-201ENST00000547118 1133 ntBASIC18.84■□□□□ 0.61
LGR5O75473 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
LGR5O75473 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.84■□□□□ 0.61
LGR5O75473 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms