Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPHN1O60890 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
OPHN1O60890 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.88■□□□□ 0.45
OPHN1O60890 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.88■□□□□ 0.45
OPHN1O60890 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPHN1O60890 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
OPHN1O60890 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OPHN1O60890 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPHN1O60890 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OPHN1O60890 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.87■□□□□ 0.45
OPHN1O60890 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.87■□□□□ 0.45
OPHN1O60890 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
OPHN1O60890 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.87■□□□□ 0.45
OPHN1O60890 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
OPHN1O60890 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 AL049757.1-201ENST00000616842 1596 ntBASIC17.87■□□□□ 0.45
OPHN1O60890 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OPHN1O60890 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
OPHN1O60890 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.86■□□□□ 0.45
OPHN1O60890 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.86■□□□□ 0.45
OPHN1O60890 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.86■□□□□ 0.45
OPHN1O60890 AC027601.4-201ENST00000611259 610 ntBASIC17.86■□□□□ 0.45
OPHN1O60890 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
OPHN1O60890 AL121761.2-201ENST00000598007 1648 ntBASIC17.86■□□□□ 0.45
OPHN1O60890 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.86■□□□□ 0.45
OPHN1O60890 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.86■□□□□ 0.45
OPHN1O60890 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPHN1O60890 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
OPHN1O60890 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
OPHN1O60890 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
OPHN1O60890 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.85■□□□□ 0.45
OPHN1O60890 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
OPHN1O60890 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
OPHN1O60890 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 HNRNPDP1-201ENST00000439535 754 ntBASIC17.85■□□□□ 0.45
OPHN1O60890 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
OPHN1O60890 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms