Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC012640.2-201ENST00000561606 901 ntBASIC16.42■□□□□ 0.22
PRAMEF4O60810 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 RN7SL510P-201ENST00000581311 263 ntBASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF4O60810 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF4O60810 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AC104692.2-201ENST00000603054 253 ntBASIC16.41■□□□□ 0.22
PRAMEF4O60810 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF4O60810 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF4O60810 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 AL118508.1-201ENST00000613502 2345 ntBASIC16.4■□□□□ 0.22
PRAMEF4O60810 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 AL603756.1-201ENST00000606511 2163 ntBASIC16.4■□□□□ 0.22
PRAMEF4O60810 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 LAGE3P1-201ENST00000425356 484 ntBASIC16.4■□□□□ 0.22
PRAMEF4O60810 FAM197Y8-203ENST00000450145 560 ntBASIC16.4■□□□□ 0.22
PRAMEF4O60810 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 AL031008.1-201ENST00000619963 541 ntBASIC16.4■□□□□ 0.22
PRAMEF4O60810 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF4O60810 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF4O60810 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRAMEF4O60810 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
PRAMEF4O60810 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.39■□□□□ 0.21
PRAMEF4O60810 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRAMEF4O60810 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF4O60810 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.39■□□□□ 0.21
PRAMEF4O60810 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRAMEF4O60810 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PRAMEF4O60810 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms