Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNPS1P1-201ENST00000507437 918 ntBASIC16.03■□□□□ 0.16
HCN1O60741 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.03■□□□□ 0.16
HCN1O60741 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.03■□□□□ 0.16
HCN1O60741 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.03■□□□□ 0.16
HCN1O60741 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.03■□□□□ 0.16
HCN1O60741 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HCN1O60741 AL391005.1-201ENST00000623953 2435 ntBASIC16.03■□□□□ 0.16
HCN1O60741 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HCN1O60741 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 AL356309.3-201ENST00000624132 1934 ntBASIC16.02■□□□□ 0.16
HCN1O60741 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.02■□□□□ 0.16
HCN1O60741 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
HCN1O60741 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.02■□□□□ 0.16
HCN1O60741 AL022342.1-201ENST00000400363 863 ntBASIC16.02■□□□□ 0.16
HCN1O60741 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.02■□□□□ 0.16
HCN1O60741 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.02■□□□□ 0.16
HCN1O60741 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.02■□□□□ 0.16
HCN1O60741 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.02■□□□□ 0.16
HCN1O60741 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HCN1O60741 AL139288.1-201ENST00000623748 933 ntBASIC16.02■□□□□ 0.16
HCN1O60741 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
HCN1O60741 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HCN1O60741 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HCN1O60741 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HCN1O60741 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.02■□□□□ 0.15
HCN1O60741 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCN1O60741 AC016396.2-201ENST00000562575 1417 ntBASIC16.02■□□□□ 0.15
HCN1O60741 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCN1O60741 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HCN1O60741 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
HCN1O60741 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HCN1O60741 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.01■□□□□ 0.15
HCN1O60741 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HCN1O60741 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 AL590627.1-203ENST00000421194 1026 ntBASIC16.01■□□□□ 0.15
HCN1O60741 AC103564.2-201ENST00000432853 1299 ntBASIC16.01■□□□□ 0.15
HCN1O60741 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 RNA5SP419-201ENST00000515908 135 ntBASIC16.01■□□□□ 0.15
HCN1O60741 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.01■□□□□ 0.15
HCN1O60741 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.01■□□□□ 0.15
HCN1O60741 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.01■□□□□ 0.15
HCN1O60741 AP000867.4-201ENST00000641616 219 ntBASIC16.01■□□□□ 0.15
HCN1O60741 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCN1O60741 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms