Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCA5O60264 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.07■□□□□ 0.96
SMARCA5O60264 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.07■□□□□ 0.96
SMARCA5O60264 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.07■□□□□ 0.96
SMARCA5O60264 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.07■□□□□ 0.96
SMARCA5O60264 AC008735.5-201ENST00000623544 497 ntBASIC21.07■□□□□ 0.96
SMARCA5O60264 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.07■□□□□ 0.96
SMARCA5O60264 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SMARCA5O60264 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SMARCA5O60264 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 PAWRP1-201ENST00000451083 565 ntBASIC21.06■□□□□ 0.96
SMARCA5O60264 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
SMARCA5O60264 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.06■□□□□ 0.96
SMARCA5O60264 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.06■□□□□ 0.96
SMARCA5O60264 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.06■□□□□ 0.96
SMARCA5O60264 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.06■□□□□ 0.96
SMARCA5O60264 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMARCA5O60264 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCA5O60264 AL645728.1-201ENST00000366221 2101 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SMARCA5O60264 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCA5O60264 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMARCA5O60264 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCA5O60264 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 PI4KAP1-204ENST00000612579 1703 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCA5O60264 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.05■□□□□ 0.96
SMARCA5O60264 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMARCA5O60264 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMARCA5O60264 AL031284.1-201ENST00000419297 478 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 RPS15P9-201ENST00000494093 319 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCA5O60264 AC006557.2-201ENST00000592985 1240 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.05■□□□□ 0.96
SMARCA5O60264 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCA5O60264 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.05■□□□□ 0.96
SMARCA5O60264 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.05■□□□□ 0.96
SMARCA5O60264 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SMARCA5O60264 UBALD1-205ENST00000590891 2641 ntBASIC21.05■□□□□ 0.96
SMARCA5O60264 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMARCA5O60264 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
SMARCA5O60264 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMARCA5O60264 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.04■□□□□ 0.96
SMARCA5O60264 TPM4P1-201ENST00000436100 807 ntBASIC21.04■□□□□ 0.96
SMARCA5O60264 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.04■□□□□ 0.96
SMARCA5O60264 AC092910.1-201ENST00000482027 1129 ntBASIC21.04■□□□□ 0.96
SMARCA5O60264 AC105339.3-201ENST00000560043 636 ntBASIC21.04■□□□□ 0.96
SMARCA5O60264 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
SMARCA5O60264 AL356488.2-201ENST00000602755 427 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms