Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASQ2O14958 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.28■□□□□ 0.2
CASQ2O14958 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.28■□□□□ 0.2
CASQ2O14958 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASQ2O14958 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.27■□□□□ 0.2
CASQ2O14958 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CASQ2O14958 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.27■□□□□ 0.2
CASQ2O14958 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.27■□□□□ 0.2
CASQ2O14958 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASQ2O14958 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.27■□□□□ 0.2
CASQ2O14958 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 WWOX-216ENST00000569818 525 ntBASIC16.27■□□□□ 0.2
CASQ2O14958 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CASQ2O14958 AC008403.3-201ENST00000598924 454 ntBASIC16.27■□□□□ 0.2
CASQ2O14958 AC069544.1-201ENST00000609399 999 ntBASIC16.27■□□□□ 0.2
CASQ2O14958 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.27■□□□□ 0.2
CASQ2O14958 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CASQ2O14958 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
CASQ2O14958 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.27■□□□□ 0.19
CASQ2O14958 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CASQ2O14958 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
CASQ2O14958 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.27■□□□□ 0.19
CASQ2O14958 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.27■□□□□ 0.19
CASQ2O14958 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CASQ2O14958 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 DBET-201ENST00000630918 3363 ntBASIC16.27■□□□□ 0.19
CASQ2O14958 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.19
CASQ2O14958 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASQ2O14958 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 AC239809.2-201ENST00000415381 517 ntBASIC16.26■□□□□ 0.19
CASQ2O14958 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.26■□□□□ 0.19
CASQ2O14958 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.26■□□□□ 0.19
CASQ2O14958 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 AL023875.1-201ENST00000640777 796 ntBASIC16.26■□□□□ 0.19
CASQ2O14958 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASQ2O14958 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASQ2O14958 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.26■□□□□ 0.19
CASQ2O14958 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.26■□□□□ 0.19
CASQ2O14958 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.26■□□□□ 0.19
CASQ2O14958 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms