Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 VN2R19P-201ENST00000442399 1052 ntBASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC008667.4-201ENST00000607370 168 ntBASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 PHGDH-209ENST00000641074 1780 ntBASIC16.82■□□□□ 0.28
TMX2-CTNND1H3BSU7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC004817.3-201ENST00000602957 2129 ntBASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 IGHV3-52-201ENST00000519770 353 ntBASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 AL049757.1-201ENST00000616842 1596 ntBASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMX2-CTNND1H3BSU7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 LINC02199-201ENST00000506655 2702 ntBASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.8■□□□□ 0.28
TMX2-CTNND1H3BSU7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms