Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 AC002310.6-201ENST00000624451 1377 ntBASIC15.1■□□□□ 0.01
NPIPB4C9JG80 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.09■□□□□ 0.01
NPIPB4C9JG80 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.09■□□□□ 0.01
NPIPB4C9JG80 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPB4C9JG80 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
NPIPB4C9JG80 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPB4C9JG80 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPB4C9JG80 AL603756.1-201ENST00000606511 2163 ntBASIC15.08■□□□□ 0.01
NPIPB4C9JG80 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.08■□□□□ 0.01
NPIPB4C9JG80 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 AC006504.4-201ENST00000592118 1568 ntBASIC15.08■□□□□ 0
NPIPB4C9JG80 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.08■□□□□ 0
NPIPB4C9JG80 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.08■□□□□ 0
NPIPB4C9JG80 AC073621.1-201ENST00000392730 636 ntBASIC15.08■□□□□ 0
NPIPB4C9JG80 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NPIPB4C9JG80 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 AC136632.2-201ENST00000512891 861 ntBASIC15.08■□□□□ 0
NPIPB4C9JG80 OR7E14P-202ENST00000530490 1290 ntBASIC15.08■□□□□ 0
NPIPB4C9JG80 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.08■□□□□ 0
NPIPB4C9JG80 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.08■□□□□ 0
NPIPB4C9JG80 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB4C9JG80 AC012313.10-201ENST00000623509 926 ntBASIC15.08■□□□□ 0
NPIPB4C9JG80 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB4C9JG80 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NPIPB4C9JG80 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NPIPB4C9JG80 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.08■□□□□ 0
NPIPB4C9JG80 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NPIPB4C9JG80 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.08■□□□□ 0
NPIPB4C9JG80 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPB4C9JG80 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 PI4KAP1-204ENST00000612579 1703 ntBASIC15.07■□□□□ 0
NPIPB4C9JG80 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NPIPB4C9JG80 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.07■□□□□ 0
NPIPB4C9JG80 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.07■□□□□ 0
NPIPB4C9JG80 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.07■□□□□ 0
NPIPB4C9JG80 AC018712.1-201ENST00000455767 687 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms