Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCCD1A6NED2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
RCCD1A6NED2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 AC246785.2-201ENST00000432512 513 ntBASIC18.17■□□□□ 0.5
RCCD1A6NED2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 AC011270.2-201ENST00000624293 2550 ntBASIC18.17■□□□□ 0.5
RCCD1A6NED2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 ME2P1-201ENST00000426028 1970 ntBASIC18.17■□□□□ 0.5
RCCD1A6NED2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 PMPCAP1-201ENST00000508114 1576 ntBASIC18.17■□□□□ 0.5
RCCD1A6NED2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
RCCD1A6NED2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCCD1A6NED2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 AL365203.3-201ENST00000609742 2057 ntBASIC18.16■□□□□ 0.5
RCCD1A6NED2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 TP73-AS1-210ENST00000637775 1455 ntBASIC18.16■□□□□ 0.5
RCCD1A6NED2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 OR6D1P-202ENST00000641007 5290 ntBASIC18.16■□□□□ 0.5
RCCD1A6NED2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 AC004817.3-201ENST00000602957 2129 ntBASIC18.16■□□□□ 0.5
RCCD1A6NED2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.16■□□□□ 0.5
RCCD1A6NED2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCCD1A6NED2 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.15■□□□□ 0.5
RCCD1A6NED2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 AL136038.3-201ENST00000561909 1096 ntBASIC18.15■□□□□ 0.5
RCCD1A6NED2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms