Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 AC068418.2-201ENST00000577309 3703 ntBASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TCRBV3S1A0A5B6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 LINC00895-201ENST00000629028 1637 ntBASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AC122714.2-201ENST00000502787 707 ntBASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 DUX4L17-201ENST00000557360 1267 ntBASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AC111152.3-201ENST00000569699 673 ntBASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 ITM2C-210ENST00000620962 501 ntBASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV3S1A0A5B6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CD99P1-205ENST00000527459 561 ntBASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 AC142381.4-202ENST00000563973 229 ntBASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 KRT8P10-201ENST00000450021 1447 ntBASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV3S1A0A5B6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms