Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF103-CHMP3A0A140T963 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF103-CHMP3A0A140T963 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF103-CHMP3A0A140T963 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF103-CHMP3A0A140T963 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC016396.2-201ENST00000562575 1417 ntBASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 DUX4L26-201ENST00000489078 1255 ntBASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF103-CHMP3A0A140T963 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 AC010460.3-201ENST00000511359 1579 ntBASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 RCN1P1-201ENST00000400413 996 ntBASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 GUSBP12-201ENST00000513727 720 ntBASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 AL139327.4-201ENST00000612362 153 ntBASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF103-CHMP3A0A140T963 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 NORAD-201ENST00000565493 5339 ntBASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 PCDHB17P-201ENST00000539533 2393 ntBASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RNF103-CHMP3A0A140T963 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms