Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 VN2R19P-201ENST00000442399 1052 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 FAM185BP-201ENST00000443595 716 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC034105.1-201ENST00000563488 319 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 HTR7P1-202ENST00000624664 4411 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 AL391256.1-201ENST00000443260 1855 ntBASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 SLC22A20-204ENST00000530038 1673 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 IGLL3P-201ENST00000412472 434 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AL590627.1-203ENST00000421194 1026 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 HCG4B-203ENST00000450128 991 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 MIR4751-201ENST00000578027 74 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC005412.3-201ENST00000580309 715 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ACTL9-202ENST00000612068 1252 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 AL139011.1-202ENST00000642063 584 ntBASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRBV5-4A0A0C4DH59 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 AL353732.1-201ENST00000569618 1459 ntBASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV5-4A0A0C4DH59 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms