Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 AC120114.3-201ENST00000611923 658 ntBASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 AC011270.2-201ENST00000624293 2550 ntBASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 REXO1L11P-201ENST00000620964 1927 ntBASIC20.59■□□□□ 0.89
DDX49Q9Y6V7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 SLC25A1P1-201ENST00000528351 927 ntBASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 AL049840.3-201ENST00000602669 611 ntBASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.58■□□□□ 0.89
DDX49Q9Y6V7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.58■□□□□ 0.88
DDX49Q9Y6V7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 LINC02199-201ENST00000506655 2702 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 FER1L4-210ENST00000615531 5998 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 FAM197Y8-203ENST00000450145 560 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 AC113404.2-201ENST00000507884 177 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 AC114341.1-201ENST00000618070 349 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 LINC01451-201ENST00000623792 534 ntBASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX49Q9Y6V7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 TP73-AS1-210ENST00000637775 1455 ntBASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX49Q9Y6V7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms