Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 RPS2P28-201ENST00000314255 741 ntBASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 RPS2P1-201ENST00000434010 821 ntBASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AC124947.2-201ENST00000547118 1133 ntBASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AL160237.2-201ENST00000556165 472 ntBASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB13Q9Y5F0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 AC018712.1-201ENST00000455767 687 ntBASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB13Q9Y5F0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AP002469.2-201ENST00000531724 424 ntBASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AC092053.1-201ENST00000605787 1936 ntBASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AC060834.1-201ENST00000443027 2032 ntBASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB13Q9Y5F0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms