Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 MYCLP1-201ENST00000372451 1075 ntBASIC16.21■□□□□ 0.19
AP4S1Q9Y587 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 AC024563.2-201ENST00000603282 481 ntBASIC16.21■□□□□ 0.19
AP4S1Q9Y587 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 AC116562.4-202ENST00000641738 218 ntBASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4S1Q9Y587 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
AP4S1Q9Y587 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
AP4S1Q9Y587 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP4S1Q9Y587 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
AP4S1Q9Y587 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.2■□□□□ 0.18
AP4S1Q9Y587 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
AP4S1Q9Y587 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AL136379.1-201ENST00000623471 2642 ntBASIC16.19■□□□□ 0.18
AP4S1Q9Y587 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 DBET-201ENST00000630918 3363 ntBASIC16.19■□□□□ 0.18
AP4S1Q9Y587 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
AP4S1Q9Y587 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms