Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 AC022211.2-201ENST00000585075 2527 ntBASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 AP002383.4-201ENST00000442518 975 ntBASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 STK25P1-201ENST00000585406 838 ntBASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
POLR1DQ9Y2S0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 AC093458.2-201ENST00000623150 629 ntBASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
POLR1DQ9Y2S0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 NUS1P2-201ENST00000417358 873 ntBASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AC092119.3-201ENST00000612618 583 ntBASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AC073592.5-201ENST00000624854 528 ntBASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.31■□□□□ 0.04
POLR1DQ9Y2S0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms