Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 AC138035.3-201ENST00000622706 2791 ntBASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH1Q9Y2L9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC093525.9-201ENST00000624961 1746 ntBASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC124947.2-201ENST00000547118 1133 ntBASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRCH1Q9Y2L9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH1Q9Y2L9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 NIFKP9-201ENST00000419265 221 ntBASIC16.29■□□□□ 0.2
LRCH1Q9Y2L9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms