Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.21■□□□□ 0.19
LHX6Q9UPM6 FAM8A2P-201ENST00000528813 1142 ntBASIC16.21■□□□□ 0.19
LHX6Q9UPM6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 MIR4525-201ENST00000580000 75 ntBASIC16.21■□□□□ 0.19
LHX6Q9UPM6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 AC144521.1-201ENST00000607148 956 ntBASIC16.21■□□□□ 0.19
LHX6Q9UPM6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.21■□□□□ 0.19
LHX6Q9UPM6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.21■□□□□ 0.18
LHX6Q9UPM6 OR6D1P-202ENST00000641007 5290 ntBASIC16.21■□□□□ 0.18
LHX6Q9UPM6 AC132938.6-201ENST00000623828 1655 ntBASIC16.21■□□□□ 0.18
LHX6Q9UPM6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LHX6Q9UPM6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LHX6Q9UPM6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 AL671277.1-201ENST00000429656 993 ntBASIC16.2■□□□□ 0.18
LHX6Q9UPM6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 NPM1P28-201ENST00000492269 840 ntBASIC16.2■□□□□ 0.18
LHX6Q9UPM6 KRT8P48-201ENST00000515599 1220 ntBASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 MIR6805-201ENST00000615055 62 ntBASIC16.2■□□□□ 0.18
LHX6Q9UPM6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LHX6Q9UPM6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 AC139713.2-201ENST00000641328 2723 ntBASIC16.19■□□□□ 0.18
LHX6Q9UPM6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 AC002056.1-201ENST00000395613 760 ntBASIC16.19■□□□□ 0.18
LHX6Q9UPM6 AL078595.1-201ENST00000404458 226 ntBASIC16.19■□□□□ 0.18
LHX6Q9UPM6 PSMC1P2-201ENST00000423961 1204 ntBASIC16.19■□□□□ 0.18
LHX6Q9UPM6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LHX6Q9UPM6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms