Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COPS3Q9UNS2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 AL135999.2-201ENST00000622438 1686 ntBASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 AC104076.2-201ENST00000448912 469 ntBASIC15.29■□□□□ 0.04
COPS3Q9UNS2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
COPS3Q9UNS2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 AL353593.2-201ENST00000602529 1483 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 FAM220CP-201ENST00000395253 831 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 AC103564.2-201ENST00000432853 1299 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 AC063952.2-201ENST00000498792 1227 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 HYMAI-201ENST00000635591 3347 ntBASIC15.28■□□□□ 0.04
COPS3Q9UNS2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
COPS3Q9UNS2 FRMD8P1-201ENST00000440433 1524 ntBASIC15.27■□□□□ 0.04
COPS3Q9UNS2 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.04
COPS3Q9UNS2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COPS3Q9UNS2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms