Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AC011676.5-201ENST00000624864 2660 ntBASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AC010654.1-201ENST00000615722 808 ntBASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 NKILA-202ENST00000614771 2598 ntBASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 HTR5BP-201ENST00000430851 1154 ntBASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AC002558.1-201ENST00000488906 803 ntBASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AL078644.1-201ENST00000609881 752 ntBASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.34■□□□□ 0.69
HDAC6Q9UBN7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 KRT18P28-201ENST00000453838 1332 ntBASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.33■□□□□ 0.69
HDAC6Q9UBN7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 OR7E47P-204ENST00000575924 449 ntBASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HDAC6Q9UBN7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
HDAC6Q9UBN7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms